非结构化数据集中的精确模式匹配(文本或CSV文件)

时间:2014-10-25 15:12:11

标签: regex r grepl

我需要找出匹配CSV或文本文件中具有非结构化数据集的符号,字母和数字的精确模式组合的最佳方法。

我需要准确提取模式“BR1*********”(BR1 +正好9位数),它位于行的中间:61:和模式“?54***”( ?54 +正好3位数),总是在行的末尾:61:。

两种模式都是重复的,但具有不同的数字组合。

到目前为止,我已尝试使用grepgrepl但未成功。我总是收到整行,这个模式大致匹配,但不是符号和数字的完全匹配。

以下是数据集的一小部分:

:11:hgttu6576575?//80&&80980jhkhkhlkhkh  gjdggfjsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1678899458iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54160
:11:hgggdgf79878yiuhlkhkh  gjdggfhuihiuhuiou89 ioiojsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1234885765iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54190

5 个答案:

答案 0 :(得分:3)

gsubfn包中的

strapplyc可用于提取这些部分。在这里,我们提取整个字符串,或者如果您只想要数字部分在数字部分周围放置括号,例如pat1 <- "BR(1\\d{9})"

library(gsubfn)

pat1 <- "BR1\\d{9}"
pat2 <- "[?]54\\d{3}$"

strapplyc(lines, pat1, simplify = c)
## [1] "BR1678899458" "BR1234885765"

strapplyc(lines, pat2, simplify = c)
## [1] "?54160" "?54190"

或两者同时出现:

strapplyc(lines, paste(pat1, pat2, sep = "|"), simplify = c)
## [1] "BR1678899458" "?54160"       "BR1234885765" "?54190"  

如果您想要行号(即第一行是1,第二行是2等)而不是值本身,请使用相同模式的grep

已添加如果只有几千行,则读取文件应该不会有问题:

lines <- readLines("File.txt")

如果它确实太大,你可以在sqldf包中读取use read.csv.sql,在一行代码中可以读取设置,sqlite数据库将文件读入其中,然后将一行子集提取到R.我们假设文件中没有?,但是如果使用其他分隔符 不在文件中:

library(sqldf)

lines <- read.csv.sql("File.txt", header = FALSE, sep = "?", 
      sql = "select * from file where V1 like '%BR1%' or V1 like '%54%'")
# now use strapplyc as above

答案 1 :(得分:2)

尝试

   library(stringr)
   unlist(str_extract_all(lines, "(BR1\\d{9})|(\\?54\\d{3})"))
   #[1] "BR1678899458" "?54160"        "BR1234885765" "?54190"   

更新

如果它是一个巨大的文件,你可以使用stringi,这将更快

  library(stringi)
  na.omit(unlist(stri_extract_all_regex(lines, "(BR1\\d{9})|(\\?54\\d{3})")))
  #[1] "BR1678899458" "?54160"       "BR1234885765" "?54190"     

数据

lines <- readLines(textConnection(':11:hgttu6576575?//80&&80980jhkhkhlkhkh  gjdggfjsdf?kjhkuhsfk778798978**&
 :27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
 :61:kjljlkfjsdlBR1678899458iyuyugug7787?>?///uhhiuyi jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54160
 :11:hgggdgf79878yiuhlkhkh  gjdggfhuihiuhuiou89 ioiojsdf?kjhkuhsfk778798978**&
 :27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
 :61:kjljlkfjsdlBR1234885765iyuyugug7787?>?///uhhiuyi jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54190'))

答案 2 :(得分:2)

dat <- readLines(textConnection(":11:hgttu6576575?//80&&80980jhkhkhlkhkh  gjdggfjsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1678899458iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54160
:11:hgggdgf79878yiuhlkhkh  gjdggfhuihiuhuiou89 ioiojsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1234885765iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54190"))

library(stringr)

unlist(str_match_all(dat, "(BR1[[:digit:]]{9})|(\\?54[[:digit:]]{3})"))
##  [1] "BR1678899458" "BR1678899458" ""             "?54160"      
##  [5] ""             "?54160"       "BR1234885765" "BR1234885765"
##  [9] ""             "?54190"       ""             "?54190"

如果我们对您需要的格式有更多了解,我们可以为您提供更好的帮助。

答案 3 :(得分:2)

我对自然语言描述的阅读是只有2行符合要求。例如,第4行确实有一个&#34;?54nnn $&#34;模式,但该行不以&#34;:61:&#34;:

开头
dat=readLines(textConnection(":11:hgttu6576575?//80&&80980jhkhkhlkhkh  gjdggfjsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1678899458iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54160
:11:hgggdgf79878yiuhlkhkh  gjdggfhuihiuhuiou89 ioiojsdf?kjhkuhsfk778798978**&
:27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
:61:kjljlkfjsdlBR1234885765iyuyugug7787?>?///uhhiuyi
jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54190"))

> grep("^:61:.+(BR1\\d{9}|[?]54\\d{3}$)", dat)
#[1] 3 7

修改测试用例以查看我的模式建议是否正确地执行了我认为的问题:

> dat=readLines(textConnection(":11:hgttu6576575?//80&&80980jhkhkhlkhkh  gjdggfjsdf?kjhkuhsfk778798978**&
+ :27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
+ :61:kjljlkfjsdlBR1678899458iyuyugug7787?>?///uhhiuyi
+ :61:jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54160
+ :11:hgggdgf79878yiuhlkhkh  gjdggfhuihiuhuiou89 ioiojsdf?kjhkuhsfk778798978**&
+ :27:jhkjhuiy867tjhfsh/.>?kjklh8ggdhkotrdkhofkhodkgj
+ :61:kjljlkfjsdlBR1234885765iyuyugug7787?>?///uhhiuyi
+ jhkhkjhiy878697y8hukjlu97 ??///khiuy8oujhuhijk?54190")
+ )
> grep("^:61:.+(BR1\\d{9}|[?]54\\d{3}$)", dat)
[1] 3 4 7

答案 4 :(得分:2)

您可以使用基础R来处理这些匹配的提取。

> unlist(regmatches(lines, gregexpr('BR1\\d{9}|\\?54\\d{3}', lines)))
# [1] "BR1678899458" "?54160"       "BR1234885765" "?54190" 
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