在facet_wrap中绘制平均值

时间:2016-04-20 16:16:15

标签: r ggplot2

我知道以前曾经问过这个问题,但是当我在策划我的意思时,你能看到我做错了什么吗?它不是单个box_plots上的plottet,而是叠加在两个box之间。

ggplot(y.crc.iso.cpm.spike_topPreopIso.m, aes(IsomiR,value, fill=PreopIso))   +
  geom_boxplot(position=position_dodge()) + geom_point(position=position_jitterdodge(1)) + 
  stat_summary(fun.y=mean,aes(group=PreopIso), colour="red", geom="point", 
               shape=18, size=5,show_guide = FALSE) +
  facet_wrap(~IsomiR2, scales="free",ncol=5)


> head(y.crc.iso.cpm.spike_topPreopIso.m)
                                            IsomiR     logFC   AveExpr        t      P.Value  adj.P.Val variable     value
1  hsa-miR-10b-5p ACCCTGTAGAACCGAATTTGC 0 I-C t tg 0.8098305  4.234309 3.733419 3.279777e-04 0.04531820     1_JH  3.193483
2     hsa-miR-10b-5p ACCCTGTAGAACCGAATTTGT 0 0 t g 0.6487336  8.885546 4.137780 7.783938e-05 0.02381885     1_JH  8.435233
3    hsa-miR-10b-5p TACCCTGTAGAACCGAATTTG 0 0 0 tg 0.6775943  9.228362 4.286113 4.492560e-05 0.01832964     1_JH  9.120013
4 hsa-miR-10b-5p TACCCTGTAGAACCGAATTTGC 0 I-C 0 tg 0.6320121  8.901611 3.698110 3.702467e-04 0.04531820     1_JH  7.802288
5    hsa-miR-10b-5p TACCCTGTAGAACCGAATTTGT 0 0 0 g 0.6159228 13.540335 3.979716 1.380476e-04 0.02922454     1_JH 12.931005
6    hsa-miR-125b-5p TCCCTGAGACCCTAACTTGT 0 0 0 ga 0.7451602  7.433754 3.914287 1.743031e-04 0.03047814     1_JH  7.002717
                                                                                         IsomiR2 PreopIso
1   hsa-miR-10b-5p \n  ACCCTGTAGAACCGAATTTGC \n MisMatch: 0 \n NTA: I-C \n 3'mod: t \n 5'mod: tg        0
2      hsa-miR-10b-5p \n  ACCCTGTAGAACCGAATTTGT \n MisMatch: 0 \n NTA: 0 \n 3'mod: t \n 5'mod: g        0
3     hsa-miR-10b-5p \n  TACCCTGTAGAACCGAATTTG \n MisMatch: 0 \n NTA: 0 \n 3'mod: 0 \n 5'mod: tg        0
4  hsa-miR-10b-5p \n  TACCCTGTAGAACCGAATTTGC \n MisMatch: 0 \n NTA: I-C \n 3'mod: 0 \n 5'mod: tg        0
5     hsa-miR-10b-5p \n  TACCCTGTAGAACCGAATTTGT \n MisMatch: 0 \n NTA: 0 \n 3'mod: 0 \n 5'mod: g        1
6     hsa-miR-125b-5p \n  TCCCTGAGACCCTAACTTGT \n MisMatch: 0 \n NTA: 0 \n 3'mod: 0 \n 5'mod: ga        1

0 个答案:

没有答案