Question

我想写一个列表的字典到tsv文件。问题是我无法转置列表。

我有以下列表的字典：

打印d

defaultdict(<type 'list'>, {1: ['Genemark1.10973_g', 'missense_variant', 'MODERATE', 'scaffold_100', 305, '605', 'Asp', 'Gly', 'YES', 'NO', 'NO', 'NO'], 2: ['estExt_Genewise1Plus.C_1000001', 'disruptive_inframe_insertion', 'MODERATE', 'scaffold_100', 5002, '7172', 'Gly', '', 'YES', 'NO', 'NO', 'NO'], 3: ['fgenesh2_pm.100_#_3', 'inframe_insertion', 'MODERATE', 'scaffold_100', 10104, '265266', 'Leu', '', 'YES', 'NO', 'NO', 'NO'], 4: ['estExt_fgenesh2_pg.C_100178', 'inframe_deletion', 'MODERATE', 'scaffold_10', 711411, '351352', 'Gln', '', 'YES', 'NO', 'NO', 'NO'], 5: ['estExt_fgenesh2_pm.C_1060001', 'disruptive_inframe_deletion', 'MODERATE', 'scaffold_106', 5189, '832', 'Leu', 'del', 'YES', 'NO', 'NO', 'NO'], 6: ['Genemark1.10980_g', 'frameshift_variant', 'HIGH', 'scaffold_101', 10838, '313', 'Leu', 'fs', 'NO', 'YES', 'NO', 'NO'], 7: ['Genemark1.10973_g', 'missense_variant', 'MODERATE', 'scaffold_100', 2043, '26', 'Ile', 'Leu', 'YES', 'NO', 'NO', 'NO'], 8: ['fgenesh2_pm.104_#_2', 'stop_gained', 'HIGH', 'scaffold_104', 8574, '310', 'Tyr', '*', 'YES', 'NO', 'NO', 'NO']})

这是我的功能：

from itertools import izip_longest
    def printAnn(d):
        rows = izip_longest(*d.values())
        w = csv.writer(sys.stdout, delimiter='\t', quoting=csv.QUOTE_NONE, lineterminator='\n')
        w.writerows(rows)

我得到的输出：

Genemark1.10973_g   estExt_Genewise1Plus.C_1000001  fgenesh2_pm.100_#_3 estExt_fgenesh2_pg.C_100178 estExt_fgenesh2_pm.C_1060001    Genemark1.10980_g   Genemark1.10973_g   fgenesh2_pm.104_#_2
missense_variant    disruptive_inframe_insertion    inframe_insertion   inframe_deletion    disruptive_inframe_deletion frameshift_variant  missense_variant    stop_gained
MODERATE    MODERATE    MODERATE    MODERATE    MODERATE    HIGH    MODERATE    HIGH
scaffold_100    scaffold_100    scaffold_100    scaffold_10 scaffold_106    scaffold_101    scaffold_100    scaffold_104
305 5002    10104   711411  5189    10838   2043    8574
605 7172    265266  351352  832 313 26  310
Asp Gly Leu Gln Leu Leu Ile Tyr
Gly             del fs  Leu *
YES YES YES YES YES NO  YES YES
NO  NO  NO  NO  NO  YES NO  NO
NO  NO  NO  NO  NO  NO  NO  NO
NO  NO  NO  NO  NO  NO  NO  NO

PS ：我已尝试izip_longest一个列表（不是列表词典），它运行正常。我缺少什么？

Answer 1

无需zip满足您的要求。想一想。您希望行的每个元素都显示在其列中，这与保持行完整无缺。

def printAnn(d):
    w = csv.writer(sys.stdout, delimiter='\t', quoting=csv.QUOTE_NONE, lineterminator='\n')
    w.writerows(d.values())

printAnn(d)
Genemark1.10973_g       missense_variant        MODERATE        scaffold_100 305     605     Asp     Gly     YES     NO      NO      NO
estExt_Genewise1Plus.C_1000001  disruptive_inframe_insertion    MODERATE scaffold_100    5002    7172    Gly             YES     NO      NO      NO
fgenesh2_pm.100_#_3     inframe_insertion       MODERATE        scaffold_100 10104   265266  Leu             YES     NO      NO      NO
estExt_fgenesh2_pg.C_100178     inframe_deletion        MODERATE       scaffold_10     711411  351352  Gln             YES     NO      NO      NO
estExt_fgenesh2_pm.C_1060001    disruptive_inframe_deletion     MODERATE scaffold_106    5189    832     Leu     del     YES     NO      NO      NO
Genemark1.10980_g       frameshift_variant      HIGH    scaffold_101    10838 313     Leu     fs      NO      YES     NO      NO
Genemark1.10973_g       missense_variant        MODERATE        scaffold_100 2043    26      Ile     Leu     YES     NO      NO      NO
fgenesh2_pm.104_#_2     stop_gained     HIGH    scaffold_104    8574    310 Tyr     *       YES     NO      NO      NO

如果这不是您想要的，请发表评论。

转置列表的dict并写入csv

1 个答案: