卡方测试错误“卡方近似可能不正确”

时间:2018-10-29 22:53:58

标签: r chi-squared

我在R中进行了卡方检验,结果是:

crianza = matrix(c(1,1,0,12,12,7,2,1,0,0,1,0,0,0,5,
      0,0,0,1,1,2,0,0,3,0,0,0,13,35,29,0,0,1,10,
      0,0,1,0,0,0,0,0),ncol=3,byrow=TRUE)
colnames (crianza) = c("Neonate","Juevenile","Adult")
rownames (crianza) = c("C.acronotus","C.limbatus","C.obscurus","C.perezi",
 "C.porosus","C.falciformis","G.cuvier","G.cirratum","M.canis",
 "R.porosus","R.lalandii","S.lewini","S.mokarran","S.tiburo")    
crianza = as.table(crianza)

Pearson's Chi-squared test

data:  crianza
X-squared = NaN, df = 26, p-value = NA

Warning message:
In chisq.test(crianza) : Chi-squared approximation may be incorrect

有人知道它为什么发出警告吗?是因为我使用了错误的方法吗?

1 个答案:

答案 0 :(得分:3)

您获得NA个值,因为您的行根本没有计数。

cc <- crianza[rowSums(crianza)>0,]
chisq.test(cc)

要规避警告,请尝试simulate.p.value=TRUE

chisq.test(cc, simulate.p.value=TRUE)

请注意,这是一个非常不平衡的表,具有模拟的p值,实际上您将获得一个小至1 /(运行模拟的数量)的值:

chisq.test(cc, simulate.p.value=TRUE, B=1e6)

在没有耐心之前,我已经达到B=1e7。您可能不必担心报告的值超出“ p值非常小,最多1e-6”

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